STRINGSTRING
ABP74400.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74400.1" - KEGG: son:SO4005 hypothetical protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74400.1KEGG- son-SO4005 hypothetical protein (290 aa)    
Predicted Functional Partners:
ABP74399.1
KEGG- shm-Shewmr7_3380 hypothetical protein (406 aa)
 
          0.886
ABP76388.1
PFAM- GCN5-related N-acetyltransferase; KEGG- son-SO3328 acetyltransferase, GNAT family (152 aa)
   
        0.774
ABP74397.1
KEGG- she-Shewmr4_0638 hypothetical protein (1223 aa)
 
 
  0.765
ABP76269.1
KEGG- she-Shewmr4_1310 hypothetical protein (639 aa)
   
          0.764
ABP74398.1
KEGG- shm-Shewmr7_3381 hypothetical protein (217 aa)
 
          0.763
ABP76889.1
KEGG- son-SO0813 hypothetical protein (480 aa)
   
          0.761
ABP76714.1
KEGG- she-Shewmr4_0079 MORN variant repeat protein (684 aa)
   
          0.761
ABP73798.1
KEGG- she-Shewmr4_0079 MORN variant repeat protein (818 aa)
   
          0.760
ABP74935.1
KEGG- shm-Shewmr7_2878 hypothetical protein (533 aa)
   
          0.758
ABP74922.1
KEGG- shm-Shewmr7_2893 hypothetical protein (296 aa)
   
          0.740
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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