STRINGSTRING
ABP74409.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74409.1" - KEGG: son:SO3987 hypothetical protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74409.1KEGG- son-SO3987 hypothetical protein (144 aa)    
Predicted Functional Partners:
ABP75276.1
KEGG- shm-Shewmr7_2499 RepA domain protein (113 aa)
   
          0.760
ABP76534.1
PFAM- type IV pilus assembly PilZ; KEGG- she-Shewmr4_1044 type IV pilus assembly PilZ (795 aa)
   
          0.724
ABP75648.1
TIGRFAM- thiamine biosynthesis protein ThiS; PFAM- thiamineS protein; KEGG- son-SO2442 thiS protein, putative (67 aa)
   
          0.723
ABP75020.1
PFAM- TPR repeat-containing protein; SMART- Tetratricopeptide domain protein; KEGG- shm-Shewmr7_2781 TPR repeat-containing protein (723 aa)
   
          0.712
ABP77015.1
KEGG- son-SO0573 hypothetical protein (294 aa)
   
          0.696
ABP74284.1
KEGG- son-SO4121 hypothetical protein (300 aa)
   
          0.681
ABP76833.1
KEGG- son-SO0881 hypothetical protein (168 aa)
   
          0.676
ABP75388.1
PFAM- aminoglycoside phosphotransferase; KEGG- son-SO2712 hypothetical protein (367 aa)
   
          0.648
ABP75468.1
KEGG- shm-Shewmr7_2273 hypothetical protein (287 aa)
   
          0.647
ABP74550.1
KEGG- shm-Shewmr7_0813 hypothetical protein (106 aa)
   
          0.639
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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