STRINGSTRING
ABP74422.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74422.1" - PFAM: TonB-dependent receptor in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74422.1PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- son-SO0737 TonB-dependent receptor, putative (678 aa)    
Predicted Functional Partners:
ABP77286.1
PFAM- HupE/UreJ protein; KEGG- she-Shewmr4_0396 HupE/UreJ protein (192 aa)
 
 
        0.725
kdpB
Potassium-transporting ATPase ATP-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily (672 aa)
     
        0.674
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (318 aa)
     
        0.653
ABP74362.1
TIGRFAM- TonB family protein; KEGG- son-SO4043 TonB domain protein (370 aa)
 
 
  0.626
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (731 aa)
     
        0.617
ABP75246.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (206 aa)
   
 
  0.571
ABP74694.1
TIGRFAM- TonB family protein; KEGG- son-SO3670 TonB1 protein (283 aa)
   
 
  0.571
ABP76680.1
TIGRFAM- methionine synthase; PFAM- dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; Vitamin B12 dependent methionine synthase, activation region; cobalamin B12-binding domain protein; KEGG- son-SO1030 5-methyltetrahydrofolate--homocysteine methyltransferase (1244 aa)
         
  0.528
ABP74423.1
Transcriptional regulator, AraC family; PFAM- helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG- shm-Shewmr7_0586 transcriptional regulator, AraC family (276 aa)
         
  0.497
ABP76599.1
PFAM- protein of unknown function DUF1624; KEGG- she-Shewmr4_0980 hypothetical protein (418 aa)
   
        0.478
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (11%) [HD]