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ABP74445.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74445.1" - RNA polymerase sigma-54 factor in Shewanella putrefaciens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
ABP74445.1RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (491 aa)    
Predicted Functional Partners:
ABP74443.1
TIGRFAM- PTS IIA-like nitrogen-regulatory protein PtsN; PFAM- phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG- shm-Shewmr7_3351 PTS IIA-like nitrogen-regulatory protein PtsN (147 aa)
 
   
  0.916
ABP74442.1
Nucleotide-binding protein Sputcn32_0712; Displays ATPase and GTPase activities (284 aa)
 
   
  0.885
ABP74444.1
TIGRFAM- ribosomal subunit interface protein; PFAM- sigma 54 modulation protein/ribosomal protein S30EA; KEGG- shm-Shewmr7_3350 sigma 54 modulation protein/ribosomal protein S30EA (95 aa)
   
   
  0.884
ABP76301.1
Sigma54 specific transcriptional regulator, Fis family; PFAM- sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; flagellar regulatory FleQ domain protein; ATPase associated with various cellular activities, AAA_5; SMART- AAA ATPase; KEGG- shm-Shewmr7_1345 sigma54 specific transcriptional regulator, fis family (477 aa)
 
     
  0.880
ABP74441.1
TIGRFAM- phosphocarrier, HPr family; PFAM- phosphocarrier HPr protein; KEGG- she-Shewmr4_0669 phosphocarrier, HPr family (91 aa)
   
   
  0.866
ABP76786.1
Transcriptional regulator, NifA subfamily, Fis family; PFAM- sigma-54 factor, interaction domain-containing protein; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART- AAA ATPase; KEGG- shm-Shewmr7_0882 transcriptional regulator, NifA subfamily, fis family (517 aa)
   
     
  0.851
ABP74103.1
KEGG- shm-Shewmr7_3764 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM- nitrogen regulation protein NR(I); PFAM- response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART- AAA ATPase (470 aa)
 
     
  0.829
ABP74097.1
GAF modulated sigma54 specific transcriptional regulator, Fis family; PFAM- sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART- AAA ATPase; KEGG- shm-Shewmr7_3771 GAF modulated sigma54 specific transcriptional regulator, fis family (633 aa)
 
     
  0.822
lptA
Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm (184 aa)
 
   
  0.815
ABP76299.1
Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM- response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART- AAA ATPase; KEGG- she-Shewmr4_1280 two component, sigma54 specific, transcriptional regulator, fis family (446 aa)
 
     
  0.812
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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