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lptA protein (Shewanella putrefaciens) - STRING interaction network
"lptA" - Lipopolysaccharide export system protein LptA in Shewanella putrefaciens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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lptALipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm (184 aa)    
Predicted Functional Partners:
lptC
Lipopolysaccharide export system protein LptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA; Belongs to the LptC family (186 aa)
 
 
  0.987
ABP74446.1
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- shm-Shewmr7_3348 ABC transporter related (243 aa)
 
   
  0.978
ABP74450.1
Arabinose 5-phosphate isomerase; KEGG- shm-Shewmr7_3344 KpsF/GutQ family protein; TIGRFAM- KpsF/GutQ family protein; PFAM- CBS domain containing protein; sugar isomerase (SIS) (325 aa)
   
        0.902
ABP74449.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC; Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family (183 aa)
   
        0.901
ABP74443.1
TIGRFAM- PTS IIA-like nitrogen-regulatory protein PtsN; PFAM- phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG- shm-Shewmr7_3351 PTS IIA-like nitrogen-regulatory protein PtsN (147 aa)
 
        0.884
ABP74445.1
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (491 aa)
 
   
  0.815
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (765 aa)
 
 
  0.803
ABP74442.1
Nucleotide-binding protein Sputcn32_0712; Displays ATPase and GTPase activities (284 aa)
 
   
  0.789
lptE
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (164 aa)
   
 
  0.674
ABP74444.1
TIGRFAM- ribosomal subunit interface protein; PFAM- sigma 54 modulation protein/ribosomal protein S30EA; KEGG- shm-Shewmr7_3350 sigma 54 modulation protein/ribosomal protein S30EA (95 aa)
   
        0.661
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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