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lptC protein (Shewanella putrefaciens) - STRING interaction network
"lptC" - Lipopolysaccharide export system protein LptC in Shewanella putrefaciens
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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lptCLipopolysaccharide export system protein LptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA; Belongs to the LptC family (186 aa)    
Predicted Functional Partners:
lptA
Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm (184 aa)
 
 
  0.987
ABP74446.1
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- shm-Shewmr7_3348 ABC transporter related (243 aa)
   
 
  0.974
ABP74449.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC; Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family (183 aa)
   
   
  0.974
ABP74450.1
Arabinose 5-phosphate isomerase; KEGG- shm-Shewmr7_3344 KpsF/GutQ family protein; TIGRFAM- KpsF/GutQ family protein; PFAM- CBS domain containing protein; sugar isomerase (SIS) (325 aa)
   
   
  0.922
lptE
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (164 aa)
   
     
  0.770
ABP74445.1
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (491 aa)
   
   
  0.725
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (765 aa)
 
 
  0.723
ABP74441.1
TIGRFAM- phosphocarrier, HPr family; PFAM- phosphocarrier HPr protein; KEGG- she-Shewmr4_0669 phosphocarrier, HPr family (91 aa)
     
      0.692
ABP74442.1
Nucleotide-binding protein Sputcn32_0712; Displays ATPase and GTPase activities (284 aa)
   
   
  0.681
ABP74907.1
PFAM- permease YjgP/YjgQ family protein; KEGG- she-Shewmr4_2826 permease YjgP/YjgQ family protein (370 aa)
 
 
  0.678
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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