STRINGSTRING
ABP74470.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74470.1" - PFAM: Radical SAM domain protein in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
ABP74470.1PFAM- Radical SAM domain protein; KEGG- vpa-VPA0443 hypothetical protein (400 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (354 aa)
       
  0.938
ABP74467.1
PFAM- Radical SAM domain protein; KEGG- vpa-VPA0442 hypothetical protein (480 aa)
 
     
  0.849
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins (192 aa)
         
  0.598
ABP74469.1
PFAM- transposase IS3/IS911 family protein; KEGG- vch-VCA0792 transposase OrfAB, subunit A (103 aa)
              0.590
ABP75733.1
PFAM- regulatory protein, AsnC/Lrp family; KEGG- shm-Shewmr7_2014 transcriptional regulator, AsnC family (168 aa)
   
 
  0.540
ABP74563.1
PFAM- regulatory protein, AsnC/Lrp family; KEGG- shm-Shewmr7_0826 transcriptional regulator, AsnC family (164 aa)
   
 
  0.540
ABP74048.1
PFAM- regulatory protein, AsnC/Lrp family; KEGG- son-SO4567 transcriptional regulator, AsnC family (143 aa)
   
 
  0.540
ABP76786.1
Transcriptional regulator, NifA subfamily, Fis family; PFAM- sigma-54 factor, interaction domain-containing protein; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART- AAA ATPase; KEGG- shm-Shewmr7_0882 transcriptional regulator, NifA subfamily, fis family (517 aa)
         
  0.520
ABP74418.1
KEGG- son-SO0728 hypothetical protein (170 aa)
         
  0.520
ABP76349.1
PFAM- DegT/DnrJ/EryC1/StrS aminotransferase; KEGG- son-SO3270 polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family (382 aa)
     
 
  0.518
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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