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ABP74482.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74482.1" - PFAM: protein of unknown function DUF481 in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74482.1PFAM- protein of unknown function DUF481; KEGG- she-Shewmr4_3261 protein of unknown function DUF481 (247 aa)    
Predicted Functional Partners:
ABP75454.1
KEGG- son-SO1913 hypothetical protein (134 aa)
   
          0.573
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (131 aa)
              0.512
priB
Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS) (101 aa)
              0.510
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (75 aa)
              0.500
ABP75267.1
KEGG- she-Shewmr4_2439 hypothetical protein (118 aa)
   
          0.495
ABP75236.1
KEGG- she-Shewmr4_2472 primosomal replication protein N’’, putative (220 aa)
   
          0.489
ABP74250.1
KEGG- son-SO4182 ATP-dependent protease La (LON) domain protein, putative (191 aa)
   
          0.467
ABP77058.1
KEGG- son-SO0514 hypothetical protein (121 aa)
   
          0.461
ABP75064.1
KEGG- son-SO1617 hypothetical protein (128 aa)
   
          0.453
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (150 aa)
              0.436
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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