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dusA protein (Shewanella putrefaciens) - STRING interaction network
"dusA" - tRNA-dihydrouridine(20/20a) synthase in Shewanella putrefaciens
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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dusAtRNA-dihydrouridine(20/20a) synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily (343 aa)    
Predicted Functional Partners:
ABP73854.1
PFAM- MscS Mechanosensitive ion channel; KEGG- shm-Shewmr7_0112 MscS mechanosensitive ion channel (422 aa)
 
 
        0.781
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (318 aa)
   
   
  0.652
rimO
Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily (472 aa)
 
   
  0.646
trmJ
tRNA (cytidine/uridine-2’-O-)-methyltransferase TrmJ; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (241 aa)
   
   
  0.626
ABP74564.1
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (226 aa)
     
   
  0.501
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family (260 aa)
   
   
  0.482
fis
DNA-binding protein Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters (101 aa)
   
   
  0.481
truD
tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs (360 aa)
 
 
  0.471
ABP74492.1
KEGG- shm-Shewmr7_0747 hypothetical protein (96 aa)
              0.469
ABP76867.1
PFAM- biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG- son-SO0840 acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase (1517 aa)
   
        0.450
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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