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ABP74511.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74511.1" - PFAM: porin, Gram-negative type in Shewanella putrefaciens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74511.1PFAM- porin, Gram-negative type; KEGG- shm-Shewmr7_0761 porin, gram-negative type (353 aa)    
Predicted Functional Partners:
ABP75201.1
KEGG- son-SO1776 outer membrane protein precursor MtrB (704 aa)
   
 
  0.721
ABP77393.1
KEGG- she-Shewmr4_3673 hypothetical protein (549 aa)
   
 
 
  0.720
ABP74356.1
KEGG- son-SO1428 outer membrane protein (662 aa)
   
 
  0.718
ABP74778.1
PFAM- OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG- son-SO3545 OmpA family protein; Belongs to the ompA family (366 aa)
   
 
  0.649
ABP75360.1
KEGG- shm-Shewmr7_1610 hypothetical protein (609 aa)
   
          0.649
ABP74497.1
KEGG- she-Shewmr4_3237 hypothetical protein (231 aa)
   
 
  0.646
ABP75236.1
KEGG- she-Shewmr4_2472 primosomal replication protein N’’, putative (220 aa)
   
          0.643
ABP77593.1
KEGG- shm-Shewmr7_3982 hypothetical protein (491 aa)
   
          0.642
ABP75235.1
UPF0319 protein Sputcn32_1510; KEGG- she-Shewmr4_2473 hypothetical protein; Belongs to the UPF0319 family (234 aa)
 
        0.641
ABP75253.1
PFAM- protein of unknown function DUF1260; KEGG- son-SO1836 hypothetical protein (129 aa)
   
          0.631
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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