STRINGSTRING
ABP74517.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74517.1" - PFAM: membrane-flanked domain in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74517.1PFAM- membrane-flanked domain; KEGG- son-SO3849 hypothetical protein (176 aa)    
Predicted Functional Partners:
ABP74516.1
KEGG- she-Shewmr4_3186 putative manganese transporter (424 aa)
 
          0.733
ABP75240.1
PFAM- porin, Gram-negative type; KEGG- she-Shewmr4_2468 porin, gram-negative type (402 aa)
   
          0.717
ABP76155.1
PFAM- porin, Gram-negative type; KEGG- son-SO3060 outer membrane porin, putative (389 aa)
   
          0.679
ABP77409.1
KEGG- shm-Shewmr7_0252 hypothetical protein (121 aa)
   
          0.674
ABP77389.1
PFAM- porin, Gram-negative type; KEGG- she-Shewmr4_3669 porin, gram-negative type (384 aa)
   
          0.669
ABP76970.1
KEGG- she-Shewmr4_3415 hypothetical protein (456 aa)
   
          0.647
ABP74362.1
TIGRFAM- TonB family protein; KEGG- son-SO4043 TonB domain protein (370 aa)
   
          0.630
ABP74366.1
KEGG- she-Shewmr4_3425 hypothetical protein (123 aa)
   
          0.613
ABP75401.1
KEGG- shm-Shewmr7_2360 hypothetical protein (112 aa)
   
          0.591
ABP74965.1
PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- son-SO1482 TonB-dependent receptor, putative (814 aa)
   
          0.576
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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