STRINGSTRING
ABP74533.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74533.1" - KEGG: cgb:cg1190 hypothetical protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74533.1KEGG- cgb-cg1190 hypothetical protein (147 aa)    
Predicted Functional Partners:
ABP74534.1
annotation not available (109 aa)
              0.665
ABP73915.1
KEGG- gme-Gmet_2490 hypothetical protein (275 aa)
   
          0.523
ABP75745.1
KEGG- vfi-VF0709 hypothetical protein (91 aa)
   
          0.487
ABP76642.1
PFAM- SEC-C motif domain protein; KEGG- ppr-PBPRA1441 hypothetical protein (112 aa)
   
          0.444
ABP76005.1
KEGG- shm-Shewmr7_2289 hypothetical protein (86 aa)
   
          0.401
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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