STRINGSTRING
ABP74547.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74547.1" - PFAM: VanZ family protein in Shewanella putrefaciens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74547.1PFAM- VanZ family protein; KEGG- she-Shewmr4_3157 VanZ family protein (119 aa)    
Predicted Functional Partners:
ABP74546.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (320 aa)
              0.782
ABP77593.1
KEGG- shm-Shewmr7_3982 hypothetical protein (491 aa)
   
          0.747
ABP75368.1
KEGG- son-SO1866 hypothetical protein (276 aa)
   
          0.668
ABP75240.1
PFAM- porin, Gram-negative type; KEGG- she-Shewmr4_2468 porin, gram-negative type (402 aa)
   
          0.604
ABP74239.1
PFAM- Arginase/agmatinase/formiminoglutamase; KEGG- she-Shewmr4_3550 arginase/agmatinase/formiminoglutamase; Belongs to the arginase family (354 aa)
   
          0.593
ABP77334.1
KEGG- son-SO0366 hypothetical protein (277 aa)
   
          0.591
ABP76537.1
KEGG- son-SO1222 membrane protein (343 aa)
   
          0.585
ABP75958.1
KEGG- son-SO2637 hypothetical protein (149 aa)
   
          0.582
ABP74965.1
PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- son-SO1482 TonB-dependent receptor, putative (814 aa)
   
          0.579
ABP74548.1
UPF0234 protein Sputcn32_0818; PFAM- protein of unknown function DUF520; KEGG- shm-Shewmr7_0811 protein of unknown function DUF520; Belongs to the UPF0234 family (161 aa)
              0.575
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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