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ABP74553.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74553.1" - PFAM: OmpA domain protein transmembrane region-containing protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74553.1PFAM- OmpA domain protein transmembrane region-containing protein; KEGG- son-SO3810 OmpA-like transmembrane domain protein (191 aa)    
Predicted Functional Partners:
ABP77506.1
PFAM- regulatory protein, LuxR; KEGG- son-SO4624 transcriptional regulator, LuxR family (248 aa)
   
          0.703
ABP74198.1
KEGG- son-SO4244 hypothetical protein (172 aa)
   
          0.678
ABP75813.1
KEGG- son-SO2095 hypothetical protein (617 aa)
   
          0.677
ABP75044.1
KEGG- son-SO1589 hypothetical protein (262 aa)
   
          0.668
ABP76388.1
PFAM- GCN5-related N-acetyltransferase; KEGG- son-SO3328 acetyltransferase, GNAT family (152 aa)
   
          0.665
ABP76163.1
KEGG- shm-Shewmr7_1490 hypothetical protein (1097 aa)
   
          0.660
ABP75383.1
PFAM- major facilitator superfamily MFS_1; KEGG- son-SO2718 hypothetical protein (384 aa)
   
          0.658
ABP77068.1
Transcriptional regulator, CadC; PFAM- transcriptional regulator domain protein; KEGG- shm-Shewmr7_3532 transcriptional regulator, CadC (427 aa)
   
          0.641
ABP73798.1
KEGG- she-Shewmr4_0079 MORN variant repeat protein (818 aa)
   
          0.629
ABP76714.1
KEGG- she-Shewmr4_0079 MORN variant repeat protein (684 aa)
   
          0.627
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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