STRINGSTRING
ABP74613.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74613.1" - PFAM: Radical SAM domain protein in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74613.1PFAM- Radical SAM domain protein; KEGG- son-SO0944 hypothetical protein (235 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (354 aa)
         
  0.900
ABP75932.1
TIGRFAM- hydrolase, TatD family; PFAM- TatD-related deoxyribonuclease; KEGG- shm-Shewmr7_1739 hydrolase, TatD family (280 aa)
            0.876
ABP74231.1
Sec-independent protein translocase TatD; PFAM- TatD-related deoxyribonuclease; KEGG- shm-Shewmr7_0398 TatD-related deoxyribonuclease (267 aa)
            0.809
ABP76544.1
PFAM- TatD-related deoxyribonuclease; KEGG- she-Shewmr4_1034 TatD-related deoxyribonuclease (254 aa)
            0.697
ABP75203.1
KEGG- shm-Shewmr7_2578 decaheme cytochrome c (663 aa)
   
          0.657
ABP75201.1
KEGG- son-SO1776 outer membrane protein precursor MtrB (704 aa)
   
        0.604
ABP76771.1
KEGG- son-SO0975 hypothetical protein (473 aa)
 
          0.591
ABP76386.1
KEGG- shm-Shewmr7_1288 NrfJ-related protein (100 aa)
   
          0.527
ABP74635.1
KEGG- she-Shewmr4_0809 hypothetical protein (136 aa)
   
          0.520
ABP74356.1
KEGG- son-SO1428 outer membrane protein (662 aa)
   
        0.518
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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