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ABP74617.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74617.1" - tRNA1(Val) in Shewanella putrefaciens
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABP74617.1tRNA1(Val) (adenine(37)-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) (238 aa)    
Predicted Functional Partners:
ABP74881.1
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- son-SO1342 RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family. ECF subfamily (192 aa)
            0.673
srmB
ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily (419 aa)
   
      0.612
ABP74882.1
Anti-sigma-E factor RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish de [...] (206 aa)
 
          0.600
ABP74883.1
PFAM- MucB/RseB family protein; KEGG- son-SO1344 sigma-E factor regulatory protein RseB (310 aa)
            0.573
slyX
PFAM- SlyX family protein; KEGG- she-Shewmr4_3036 SlyX family protein; Belongs to the SlyX family (70 aa)
   
     
  0.545
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (238 aa)
           
  0.463
rsmF
Ribosomal RNA small subunit methyltransferase F; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA (505 aa)
   
   
  0.458
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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