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ABP74621.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74621.1" - TIGRFAM: single-stranded-DNA-specific exonuclease RecJ in Shewanella putrefaciens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABP74621.1TIGRFAM- single-stranded-DNA-specific exonuclease RecJ; PFAM- phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG- shm-Shewmr7_3226 single-stranded-DNA-specific exonuclease RecJ (584 aa)    
Predicted Functional Partners:
ABP74620.1
Thiol-disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process (241 aa)
 
        0.931
lysS
Lysine--tRNA ligase; TIGRFAM- lysyl-tRNA synthetase; PFAM- tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG- shm-Shewmr7_3196 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family (500 aa)
            0.816
mpl
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate; Belongs to the MurCDEF family. Mpl subfamily (464 aa)
 
 
  0.813
ABP74201.1
KEGG- she-Shewmr4_3590 ATP-dependent DNA helicase RecQ; TIGRFAM- ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM- helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases-like (607 aa)
 
   
  0.813
xerD
TIGRFAM- tyrosine recombinase XerD; PFAM- phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG- shm-Shewmr7_3228 tyrosine recombinase XerD (300 aa)
 
   
  0.779
ABP74622.1
KEGG- son-SO0953 hypothetical protein (109 aa)
              0.770
ABP75281.1
TIGRFAM- DNA internalization-related competence protein ComEC/Rec2; PFAM- beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG- shm-Shewmr7_2493 DNA internalization-related competence protein ComEC/Rec2 (774 aa)
 
     
  0.767
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (205 aa)
 
 
  0.708
ABP76490.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA (552 aa)
 
 
 
  0.707
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (236 aa)
 
   
  0.698
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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