STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74625.1Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (189 aa)    
Predicted Functional Partners:
ABP74624.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: she:Shewmr4_0800 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.986
ABP74322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.966
ABP75735.1
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO2303 thioredoxin reductase.
  
 
 0.949
ABP77555.1
Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.854
ABP75197.1
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
 
 0.777
fur
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: son:SO1937 ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.772
ABP76598.1
PFAM: Ferritin, Dps family protein; KEGG: shm:Shewmr7_1046 ferritin, Dps family protein; Belongs to the Dps family.
  
  
 0.756
ABP73852.1
PFAM: Redoxin domain protein; KEGG: ppr:PBPRB1492 hypothetical thioredoxin.
  
 0.716
ABP74747.1
Transcriptional regulator; PFAM: Helix-turn-helix, type 11 domain protein; KEGG: she:Shewmr4_2998 putative transcriptional regulator.
  
    0.716
ABP75808.1
PFAM: Redoxin domain protein; KEGG: shm:Shewmr7_2154 redoxin domain protein.
  
 0.716
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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