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ABP74711.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74711.1" - PFAM: protein of unknown function DUF1212 in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74711.1PFAM- protein of unknown function DUF1212; KEGG- she-Shewmr4_0898 protein of unknown function DUF1212 (253 aa)    
Predicted Functional Partners:
ABP74712.1
KEGG- son-SO3647 hypothetical protein (157 aa)
   
  0.997
ABP74713.1
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis (160 aa)
              0.817
obg
GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control; Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family (388 aa)
              0.810
ABP76872.1
PFAM- Endonuclease I; KEGG- she-Shewmr4_0691 deoxyribonuclease I (259 aa)
 
            0.735
rpmA
PFAM- ribosomal protein L27; KEGG- son-SO3651 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (84 aa)
              0.473
ABP77392.1
PFAM- protein of unknown function DUF1212; KEGG- son-SO0308 hypothetical protein (406 aa)
   
   
  0.454
frdD
Fumarate reductase subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane (121 aa)
   
          0.441
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
              0.434
ABP75275.1
KEGG- shm-Shewmr7_2500 hypothetical protein (80 aa)
   
        0.422
ABP74714.1
KEGG- son-SO3645 hypothetical protein (138 aa)
              0.412
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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