STRINGSTRING
ABP74714.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74714.1" - KEGG: son:SO3645 hypothetical protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74714.1KEGG- son-SO3645 hypothetical protein (138 aa)    
Predicted Functional Partners:
ABP75016.1
KEGG- she-Shewmr4_2717 hypothetical protein (141 aa)
   
          0.780
ABP75061.1
KEGG- shm-Shewmr7_2724 hypothetical protein (131 aa)
   
          0.777
ABP74232.1
KEGG- son-SO4205 hypothetical protein (175 aa)
   
          0.772
ABP75666.1
KEGG- shm-Shewmr7_2072 hypothetical protein (105 aa)
   
          0.766
ABP77030.1
KEGG- shm-Shewmr7_3474 hypothetical protein (102 aa)
   
          0.753
ABP75958.1
KEGG- son-SO2637 hypothetical protein (149 aa)
   
          0.753
ABP76104.1
KEGG- son-SO2917 hypothetical protein (142 aa)
   
          0.742
ABP77409.1
KEGG- shm-Shewmr7_0252 hypothetical protein (121 aa)
   
          0.741
ABP76116.1
KEGG- she-Shewmr4_1469 hypothetical protein (824 aa)
   
          0.730
ABP74373.1
PFAM- HDOD; KEGG- she-Shewmr4_0609 putative signal transduction protein (381 aa)
   
          0.719
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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