STRINGSTRING
surA protein (Shewanella putrefaciens) - STRING interaction network
"surA" - Chaperone SurA in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
surAChaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation (434 aa)    
Predicted Functional Partners:
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (268 aa)
 
   
  0.943
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (328 aa)
   
  0.938
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (765 aa)
   
  0.917
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (826 aa)
 
 
  0.904
bamB
Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (395 aa)
   
 
  0.880
apaH
Bis(5’-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (274 aa)
 
 
  0.850
apaG
PFAM- ApaG domain protein; KEGG- son-SO3640 ApaG protein (126 aa)
   
   
  0.798
ABP75085.1
PFAM- outer membrane chaperone Skp (OmpH); KEGG- shm-Shewmr7_2699 outer membrane chaperone Skp (OmpH); Belongs to the skp family (165 aa)
 
 
  0.786
ABP74498.1
TIGRFAM- type I secretion outer membrane protein, TolC family; PFAM- outer membrane efflux protein; KEGG- shm-Shewmr7_0753 type I secretion outer membrane protein, TolC family (435 aa)
   
 
  0.774
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (442 aa)
   
 
  0.722
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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