STRINGSTRING
ABP74740.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74740.1" - KEGG: shm:Shewmr7_3086 hypothetical protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74740.1KEGG- shm-Shewmr7_3086 hypothetical protein (137 aa)    
Predicted Functional Partners:
ABP74741.1
PFAM- MltA-interacting MipA family protein; KEGG- son-SO3592 putative outer membrane protein (288 aa)
 
          0.961
ABP74738.1
Integral membrane sensor signal transduction histidine kinase; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG- she-Shewmr4_3007 periplasmic sensor signal transduction histidine kinase (422 aa)
 
          0.916
ABP74739.1
Two component transcriptional regulator, winged helix family; PFAM- response regulator receiver; transcriptional regulator domain protein; KEGG- shm-Shewmr7_3087 two component transcriptional regulator, winged helix family (237 aa)
 
          0.879
ABP76178.1
KEGG- son-SO3085 hypothetical protein (154 aa)
   
          0.758
ABP75368.1
KEGG- son-SO1866 hypothetical protein (276 aa)
   
          0.683
ABP75248.1
Diguanylate cyclase; PFAM- GGDEF domain containing protein; KEGG- son-SO1830 GGDEF domain protein (169 aa)
   
          0.673
ABP75753.1
KEGG- shm-Shewmr7_2042 hypothetical protein (110 aa)
   
          0.672
ABP74373.1
PFAM- HDOD; KEGG- she-Shewmr4_0609 putative signal transduction protein (381 aa)
   
          0.657
ABP73877.1
KEGG- shm-Shewmr7_0138 lipoprotein, putative (257 aa)
   
          0.653
ABP75405.1
KEGG- she-Shewmr4_1565 multi-sensor signal transduction histidine kinase; TIGRFAM- PAS sensor protein; PFAM- ATP-binding region, ATPase domain protein domain protein; PAS fold-4 domain protein; SMART- PAS domain containing protein (879 aa)
   
          0.650
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (17%) [HD]