STRINGSTRING
ABP74744.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74744.1" - KEGG: son:SO3587 hypothetical protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74744.1KEGG- son-SO3587 hypothetical protein (156 aa)    
Predicted Functional Partners:
ABP74745.1
PFAM- Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG- shm-Shewmr7_3081 glyoxalase/bleomycin resistance protein/dioxygenase (138 aa)
 
     
  0.862
ABP74985.1
KEGG- son-SO1504 hypothetical protein (173 aa)
   
          0.762
ABP76648.1
PFAM- Endonuclease/exonuclease/phosphatase; KEGG- she-Shewmr4_0969 endonuclease/exonuclease/phosphatase (396 aa)
   
          0.697
ABP77334.1
KEGG- son-SO0366 hypothetical protein (277 aa)
   
          0.693
ABP76894.1
KEGG- she-Shewmr4_3309 hypothetical protein (100 aa)
   
          0.687
ABP74611.1
KEGG- shm-Shewmr7_3238 hypothetical protein (467 aa)
   
          0.686
ABP74366.1
KEGG- she-Shewmr4_3425 hypothetical protein (123 aa)
   
          0.682
ABP74324.1
PFAM- Ig domain protein, group 1 domain protein; KEGG- shm-Shewmr7_0493 Ig domain protein, group 1 domain protein (840 aa)
   
          0.632
ABP75052.1
PFAM- beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG- she-Shewmr4_2668 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; Belongs to the beta-ketoacyl-ACP synthases family (1985 aa)
   
          0.609
ABP75240.1
PFAM- porin, Gram-negative type; KEGG- she-Shewmr4_2468 porin, gram-negative type (402 aa)
   
          0.587
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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