node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABP74325.1 | ABP74751.1 | Sputcn32_0593 | Sputcn32_1022 | PFAM: protein of unknown function DUF615; KEGG: shm:Shewmr7_0494 protein of unknown function DUF615; Belongs to the UPF0307 family. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.790 |
ABP74325.1 | obg | Sputcn32_0593 | Sputcn32_0981 | PFAM: protein of unknown function DUF615; KEGG: shm:Shewmr7_0494 protein of unknown function DUF615; Belongs to the UPF0307 family. | GTP1/OBG sub domain protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.731 |
ABP74325.1 | rplC | Sputcn32_0593 | Sputcn32_3759 | PFAM: protein of unknown function DUF615; KEGG: shm:Shewmr7_0494 protein of unknown function DUF615; Belongs to the UPF0307 family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.741 |
ABP74325.1 | rplR | Sputcn32_0593 | Sputcn32_3743 | PFAM: protein of unknown function DUF615; KEGG: shm:Shewmr7_0494 protein of unknown function DUF615; Belongs to the UPF0307 family. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.725 |
ABP74325.1 | rplS | Sputcn32_0593 | Sputcn32_1171 | PFAM: protein of unknown function DUF615; KEGG: shm:Shewmr7_0494 protein of unknown function DUF615; Belongs to the UPF0307 family. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.736 |
ABP74325.1 | rplT | Sputcn32_0593 | Sputcn32_2015 | PFAM: protein of unknown function DUF615; KEGG: shm:Shewmr7_0494 protein of unknown function DUF615; Belongs to the UPF0307 family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.725 |
ABP74325.1 | rplU | Sputcn32_0593 | Sputcn32_0979 | PFAM: protein of unknown function DUF615; KEGG: shm:Shewmr7_0494 protein of unknown function DUF615; Belongs to the UPF0307 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.732 |
ABP74751.1 | ABP74325.1 | Sputcn32_1022 | Sputcn32_0593 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | PFAM: protein of unknown function DUF615; KEGG: shm:Shewmr7_0494 protein of unknown function DUF615; Belongs to the UPF0307 family. | 0.790 |
ABP74751.1 | ABP74752.1 | Sputcn32_1022 | Sputcn32_1023 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | PFAM: protein of unknown function DUF152; KEGG: son:SO3578 conserved hypothetical protein TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.824 |
ABP74751.1 | mnmE | Sputcn32_1022 | Sputcn32_4001 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.821 |
ABP74751.1 | obg | Sputcn32_1022 | Sputcn32_0981 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | GTP1/OBG sub domain protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.923 |
ABP74751.1 | rlmB | Sputcn32_1022 | Sputcn32_0750 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | RNA methyltransferase, TrmH family, group 3; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. | 0.798 |
ABP74751.1 | rplC | Sputcn32_1022 | Sputcn32_3759 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.780 |
ABP74751.1 | rplR | Sputcn32_1022 | Sputcn32_3743 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.774 |
ABP74751.1 | rplS | Sputcn32_1022 | Sputcn32_1171 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.821 |
ABP74751.1 | rplT | Sputcn32_1022 | Sputcn32_2015 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.817 |
ABP74751.1 | rplU | Sputcn32_1022 | Sputcn32_0979 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.818 |
ABP74752.1 | ABP74751.1 | Sputcn32_1023 | Sputcn32_1022 | PFAM: protein of unknown function DUF152; KEGG: son:SO3578 conserved hypothetical protein TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.824 |
mnmE | ABP74751.1 | Sputcn32_4001 | Sputcn32_1022 | tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.821 |
mnmE | obg | Sputcn32_4001 | Sputcn32_0981 | tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | GTP1/OBG sub domain protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.555 |