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ABP74772.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74772.1" - RNA polymerase, sigma-24 subunit, ECF subfamily in Shewanella putrefaciens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ABP74772.1RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM- sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG- shm-Shewmr7_3054 RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily (201 aa)    
Predicted Functional Partners:
ABP74773.1
KEGG- she-Shewmr4_2971 hypothetical protein (251 aa)
              0.845
ABP74771.1
PFAM- von Willebrand factor, type A; KEGG- son-SO3552 von Willebrand factor type A domain protein (633 aa)
 
          0.747
ABP74882.1
Anti-sigma-E factor RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish de [...] (206 aa)
   
 
  0.724
ABP74883.1
PFAM- MucB/RseB family protein; KEGG- son-SO1344 sigma-E factor regulatory protein RseB (310 aa)
   
 
  0.623
ABP76854.1
Histidine kinase; KEGG- shm-Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (1771 aa)
     
 
  0.595
ABP76188.1
RNA polymerase sigma factor; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- shm-Shewmr7_1465 RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily (187 aa)
   
     
  0.544
ABP76043.1
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- son-SO1986 RNA polymerase sigma-70 factor, ECF subfamily (220 aa)
   
     
  0.525
ABP76189.1
KEGG- she-Shewmr4_1399 hypothetical protein (234 aa)
     
 
  0.523
ABP76310.1
KEGG- shm-Shewmr7_1337 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM- flagellar rod assembly protein/muramidase FlgJ; PFAM- Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART- Lysozyme subfamily 2 (385 aa)
       
      0.516
ABP76044.1
TIGRFAM- anti-sigma factor, putative, ChrR family; KEGG- she-Shewmr4_2276 anti-ECFsigma factor, ChrR (235 aa)
     
 
  0.512
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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