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ABP74781.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74781.1" - UPF0246 protein Sputcn32_1053 in Shewanella putrefaciens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74781.1UPF0246 protein Sputcn32_1053; PFAM- protein of unknown function DUF328; KEGG- shm-Shewmr7_3045 protein of unknown function DUF328; Belongs to the UPF0246 family (257 aa)    
Predicted Functional Partners:
ABP74780.1
TIGRFAM- amino acid carrier protein; PFAM- sodium-alanine symporter; KEGG- she-Shewmr4_2964 amino acid carrier protein (481 aa)
     
      0.578
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (296 aa)
 
        0.454
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids; Belongs to the RNase HII family (209 aa)
 
 
      0.415
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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