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ABP74786.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74786.1" - KEGG: she:Shewmr4_2958 riboflavin biosynthesis protein RibF in Shewanella putrefaciens
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ABP74786.1KEGG- she-Shewmr4_2958 riboflavin biosynthesis protein RibF; TIGRFAM- riboflavin biosynthesis protein RibF; PFAM- Riboflavin kinase / FAD synthetase; Belongs to the ribF family (311 aa)    
Predicted Functional Partners:
ileS
Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile); Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily (940 aa)
 
   
  0.968
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family (158 aa)
   
 
  0.950
ABP75741.1
TIGRFAM- riboflavin synthase, alpha subunit; PFAM- Lumazine-binding protein; KEGG- she-Shewmr4_1952 riboflavin synthase, alpha subunit (209 aa)
 
  0.947
ABP76496.1
TIGRFAM- riboflavin synthase, alpha subunit; PFAM- Lumazine-binding protein; KEGG- son-SO3468 riboflavin synthase, alpha subunit (218 aa)
   
  0.939
ABP77065.1
PFAM- oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG- she-Shewmr4_0505 oxidoreductase FAD/NAD(P)-binding domain protein (232 aa)
   
 
    0.911
ABP77287.1
TIGRFAM- HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM- Haloacid dehalogenase domain protein hydrolase; KEGG- she-Shewmr4_0395 HAD-superfamily hydrolase, subfamily IA, variant 1 (240 aa)
   
 
    0.911
murJ
Probable lipid II flippase MurJ; Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane (519 aa)
 
        0.890
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis; Belongs to the IspH family (318 aa)
 
   
  0.873
ABP76497.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (384 aa)
 
   
  0.865
cmk
KEGG- she-Shewmr4_1923 cytidylate kinase; TIGRFAM- cytidylate kinase; PFAM- cytidylate kinase region; Belongs to the cytidylate kinase family. Type 1 subfamily (230 aa)
        0.852
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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