STRINGSTRING
ABP74802.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74802.1" - PFAM: TonB-dependent receptor in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74802.1PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- shm-Shewmr7_3024 TonB-dependent receptor (872 aa)    
Predicted Functional Partners:
ABP74808.1
TIGRFAM- glucose/galactose transporter; PFAM- major facilitator superfamily MFS_1; KEGG- son-SO3503 glucose/galactose transporter (432 aa)
 
   
  0.789
ABP74803.1
Beta-N-acetylhexosaminidase; PFAM- glycoside hydrolase, family 20; Carbohydrate-binding, chitobiase/hexosaminidase-type domain protein; glycoside hydrolase, family 20 domain protein; KEGG- she-Shewmr4_2936 beta-N-acetylhexosaminidase (900 aa)
 
          0.784
ABP75241.1
PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- son-SO1822 TonB-dependent receptor, putative (933 aa)
 
   
  0.761
ABP75246.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (206 aa)
 
 
  0.758
ABP74804.1
PFAM- ATPase, BadF/BadG/BcrA/BcrD type; KEGG- shm-Shewmr7_3017 ATPase, BadF/BadG/BcrA/BcrD type (318 aa)
 
     
  0.751
ABP74362.1
TIGRFAM- TonB family protein; KEGG- son-SO4043 TonB domain protein (370 aa)
 
 
  0.748
ABP74801.1
Transcriptional regulator, LacI family; PFAM- regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG- shm-Shewmr7_3025 transcriptional regulator, LacI family (338 aa)
 
     
  0.740
ABP74694.1
TIGRFAM- TonB family protein; KEGG- son-SO3670 TonB1 protein (283 aa)
   
 
  0.711
ABP75399.1
PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- sfr-Sfri_2471 TonB-dependent receptor (951 aa)
   
   
  0.671
ABP74807.1
KEGG- she-Shewmr4_2932 hypothetical protein (384 aa)
 
          0.661
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (13%) [HD]