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ABP74810.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74810.1" - PFAM: protein of unknown function DUF861, cupin_3 in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74810.1PFAM- protein of unknown function DUF861, cupin_3; KEGG- shm-Shewmr7_3011 protein of unknown function DUF861, cupin_3 (121 aa)    
Predicted Functional Partners:
ABP74811.1
TIGRFAM- methylmalonate-semialdehyde dehydrogenase; PFAM- aldehyde dehydrogenase; KEGG- she-Shewmr4_2928 methylmalonate-semialdehyde dehydrogenase (496 aa)
              0.749
ABP74812.1
PFAM- aminotransferase class-III; KEGG- she-Shewmr4_2927 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (445 aa)
 
        0.647
ABP74809.1
KEGG- shm-Shewmr7_3012 hypothetical protein (240 aa)
 
          0.575
ABP76480.1
PFAM- Amidase; KEGG- son-SO0888 amidase (584 aa)
   
          0.574
ABP75750.1
PFAM- beta-lactamase; KEGG- shm-Shewmr7_2039 beta-lactamase (394 aa)
   
          0.525
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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