STRINGSTRING
ABP74824.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74824.1" - PFAM: binding-protein-dependent transport systems inner membrane component in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
ABP74824.1PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- shm-Shewmr7_2998 binding-protein-dependent transport systems inner membrane component (301 aa)    
Predicted Functional Partners:
ABP74825.1
PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- shm-Shewmr7_2997 binding-protein-dependent transport systems inner membrane component (271 aa)
0.999
ABP74822.1
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine (366 aa)
 
  0.997
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (378 aa)
  0.997
ABP76937.1
PFAM- ABC transporter related; Transport-associated OB domain protein; SMART- AAA ATPase; KEGG- shm-Shewmr7_0608 ABC transporter related; Belongs to the ABC transporter superfamily (349 aa)
 
  0.681
ABP74826.1
PFAM- FAD dependent oxidoreductase; KEGG- shm-Shewmr7_2996 FAD dependent oxidoreductase (428 aa)
 
          0.608
ABP74127.1
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- shm-Shewmr7_3742 ABC transporter related; Belongs to the ABC transporter superfamily (367 aa)
 
 
  0.598
ABP74828.1
TIGRFAM- 4-aminobutyrate aminotransferase; PFAM- aminotransferase class-III; KEGG- shm-Shewmr7_2994 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (425 aa)
 
     
  0.525
ABP74819.1
Transcriptional regulator, XRE family with cupin sensor; PFAM- helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG- son-SO1265 transcriptional regulator, putative (182 aa)
 
          0.492
ABP74821.1
PFAM- glutamine synthetase, catalytic region; KEGG- she-Shewmr4_2919 glutamate--ammonia ligase (451 aa)
 
          0.428
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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