STRINGSTRING
ABP74844.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74844.1" - PFAM: Peptidoglycan-binding domain 1 protein in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABP74844.1PFAM- Peptidoglycan-binding domain 1 protein; SMART- AAA ATPase; KEGG- she-Shewmr4_2896 peptidoglycan-binding domain 1 protein (559 aa)    
Predicted Functional Partners:
ABP74845.1
KEGG- she-Shewmr4_2895 general secretion pathway protein B (355 aa)
              0.861
ABP76854.1
Histidine kinase; KEGG- shm-Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (1771 aa)
 
   
  0.674
ABP74292.1
TIGRFAM- pilus (MSHA type) biogenesis protein MshL; PFAM- type II and III secretion system protein; Secretin domain protein; Secretin/TonB, short N-terminal domain; KEGG- she-Shewmr4_3486 pilus (MSHA type) biogenesis protein MshL (558 aa)
 
   
  0.647
cca
Multifunctional CCA protein; Catalyzes the addition and repair of the essential 3’- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2’- nucleotidase and 2’,3’-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3’-CCA terminus degraded by intracellular RNases (420 aa)
              0.613
ABP74299.1
KEGG- she-Shewmr4_3479 methylation site containing protein (169 aa)
 
     
  0.536
ABP76995.1
N-acetylmuramoyl-L-alanine amidase; PFAM- Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG- she-Shewmr4_0595 N-acetylmuramoyl-L-alanine amidase (476 aa)
         
  0.522
ABP74300.1
KEGG- she-Shewmr4_3478 methylation site containing protein (169 aa)
 
     
  0.519
ABP74290.1
KEGG- shm-Shewmr7_0464 MSHA biogenesis protein MshJ (216 aa)
 
          0.470
ABP77277.1
TIGRFAM- general secretion pathway protein C; KEGG- she-Shewmr4_0155 general secretion pathway protein C (308 aa)
 
   
  0.465
ABP74294.1
PFAM- TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide domain protein; KEGG- son-SO4110 MSHA biogenesis protein MshN, putative (396 aa)
 
          0.423
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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