STRINGSTRING
ABP74858.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74858.1" - KEGG: she:Shewmr4_2878 hypothetical protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74858.1KEGG- she-Shewmr4_2878 hypothetical protein (153 aa)    
Predicted Functional Partners:
ABP74860.1
KEGG- shm-Shewmr7_2958 hypothetical protein (125 aa)
              0.760
ABP74859.1
PFAM- protein of unknown function UPF0126; KEGG- shm-Shewmr7_2959 protein of unknown function UPF0126 (208 aa)
              0.755
ABP74861.1
PFAM- cobalamin biosynthesis protein CbiB; KEGG- son-SO1321 CobD-related protein (329 aa)
              0.608
mtnN
5’-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5’-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5’-methylthioribose and S-ribosylhomocysteine, respectively; Belongs to the PNP/UDP phosphorylase family. MtnN subfamily (231 aa)
              0.545
ABP74857.1
KEGG- son-SO1317 hypothetical protein (142 aa)
              0.545
ABP74494.1
PFAM- Enoyl-CoA hydratase/isomerase; KEGG- shm-Shewmr7_0749 enoyl-CoA hydratase/isomerase (245 aa)
           
  0.438
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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