Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABP74864.1 | opgH | Sputcn32_1136 | Sputcn32_2080 | PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: shm:Shewmr7_2954 glutamate synthase (ferredoxin). | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.440 |
ABP76057.1 | opgH | Sputcn32_2336 | Sputcn32_2080 | Periplasmic glucan biosynthesis protein, MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.838 |
ABP77383.1 | opgH | Sputcn32_3675 | Sputcn32_2080 | PFAM: acyltransferase 3; KEGG: she:Shewmr4_3653 acyltransferase 3. | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.449 |
opgD | opgH | Sputcn32_3021 | Sputcn32_2080 | Periplasmic glucan biosynthesis protein, MdoG; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.838 |
opgG | opgH | Sputcn32_2081 | Sputcn32_2080 | Periplasmic glucan biosynthesis protein, MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.950 |
opgH | ABP74864.1 | Sputcn32_2080 | Sputcn32_1136 | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: shm:Shewmr7_2954 glutamate synthase (ferredoxin). | 0.440 |
opgH | ABP76057.1 | Sputcn32_2080 | Sputcn32_2336 | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Periplasmic glucan biosynthesis protein, MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.838 |
opgH | ABP77383.1 | Sputcn32_2080 | Sputcn32_3675 | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | PFAM: acyltransferase 3; KEGG: she:Shewmr4_3653 acyltransferase 3. | 0.449 |
opgH | opgD | Sputcn32_2080 | Sputcn32_3021 | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Periplasmic glucan biosynthesis protein, MdoG; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | 0.838 |
opgH | opgG | Sputcn32_2080 | Sputcn32_2081 | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Periplasmic glucan biosynthesis protein, MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.950 |
opgH | plsB | Sputcn32_2080 | Sputcn32_3779 | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | PFAM: phospholipid/glycerol acyltransferase; KEGG: she:Shewmr4_3788 glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family. | 0.592 |
plsB | opgH | Sputcn32_3779 | Sputcn32_2080 | PFAM: phospholipid/glycerol acyltransferase; KEGG: she:Shewmr4_3788 glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family. | Glycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.592 |