node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rpsB | rpsD | Sputcn32_1348 | Sputcn32_3735 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
rpsB | rpsG | Sputcn32_1348 | Sputcn32_3763 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
rpsB | rpsH | Sputcn32_1348 | Sputcn32_3745 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.998 |
rpsB | rpsI | Sputcn32_1348 | Sputcn32_0745 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | PFAM: ribosomal protein S9; KEGG: shm:Shewmr7_0679 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
rpsB | rpsL | Sputcn32_1348 | Sputcn32_3764 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.999 |
rpsB | rpsM | Sputcn32_1348 | Sputcn32_3737 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.998 |
rpsB | rpsN | Sputcn32_1348 | Sputcn32_3746 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.998 |
rpsB | rpsO | Sputcn32_1348 | Sputcn32_2831 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.998 |
rpsB | rpsP | Sputcn32_1348 | Sputcn32_1168 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | PFAM: ribosomal protein S16; KEGG: shm:Shewmr7_2920 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |
rpsB | rpsQ | Sputcn32_1348 | Sputcn32_3750 | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |
rpsD | rpsB | Sputcn32_3735 | Sputcn32_1348 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | PFAM: ribosomal protein S2; KEGG: shm:Shewmr7_2708 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
rpsD | rpsG | Sputcn32_3735 | Sputcn32_3763 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
rpsD | rpsH | Sputcn32_3735 | Sputcn32_3745 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
rpsD | rpsI | Sputcn32_3735 | Sputcn32_0745 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | PFAM: ribosomal protein S9; KEGG: shm:Shewmr7_0679 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.994 |
rpsD | rpsL | Sputcn32_3735 | Sputcn32_3764 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.998 |
rpsD | rpsM | Sputcn32_3735 | Sputcn32_3737 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |
rpsD | rpsN | Sputcn32_3735 | Sputcn32_3746 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.998 |
rpsD | rpsO | Sputcn32_3735 | Sputcn32_2831 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.998 |
rpsD | rpsP | Sputcn32_3735 | Sputcn32_1168 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | PFAM: ribosomal protein S16; KEGG: shm:Shewmr7_2920 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.992 |
rpsD | rpsQ | Sputcn32_3735 | Sputcn32_3750 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |