STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANN19796.1Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)    
Predicted Functional Partners:
ANN22161.1
Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.994
ANN19799.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.994
ANN19798.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
 
  
  0.990
ANN19797.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.982
ANN22160.1
Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.976
ANN15237.1
TIGR03084 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.974
ANN19795.1
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.960
ANN19776.1
Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.905
ANN19794.1
Erythronolide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.875
ANN19793.1
4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.874
Your Current Organism:
Amycolatopsis orientalis
NCBI taxonomy Id: 31958
Other names: A. orientalis, ATCC 19795, Actinoplanes sp. ATCC 53771, Amycolatopsis orientalis orientalis, Amycolatopsis orientalis subsp. orientalis, CIP 107113, DSM 40040, IFO 12806, IMSNU 20058, ISP 5040, JCM 4235, JCM 4600, KCTC 9412, NBRC 12806, NRRL 2450, Nocardia orientalis, Streptomyces orientalis, UNIQEM 181, VKM Ac-866
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