STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dgeo_0145PFAM: Enoyl-CoA hydratase/isomerase: (2e-31); KEGG: dra:DR0114 enoyl-CoA hydratase, putative, ev=1e-88, 67% identity. (247 aa)    
Predicted Functional Partners:
Dgeo_1444
PFAM: 3-hydroxyacyl-CoA dehydrogenase-like: (3e-55) 3-hydroxyacyl-CoA dehydrogenase, NAD-binding: (3.6e-93); KEGG: dra:DR1068 3-hydroxybutyryl-CoA dehydrogenase, ev=1e-133, 85% identity.
 
 0.900
Dgeo_0146
PFAM: short-chain dehydrogenase/reductase SDR: (4.4e-10); KEGG: dra:DR0113 short chain dehydrogenase, ev=1e-137, 88% identity.
 
  0.853
Dgeo_0618
Acetyl-CoA C-acyltransferase; PFAM: Thiolase: (4.5e-110) 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal: (0.0025); KEGG: dra:DR2480 acetyl-CoA acetyltransferase, ev=0.0, 87% identity; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.678
Dgeo_0755
PFAM: Thiolase: (8.4e-92); KEGG: dra:DR1428 acetyl-CoA acetyltransferase, ev=0.0, 85% identity; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.678
Dgeo_1305
PFAM: Thiolase: (4e-110); KEGG: dra:DRA0053 acetyl-CoA acetyltransferase, ev=0.0, 81% identity; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.678
Dgeo_1441
PFAM: Thiolase: (6.2e-154); KEGG: dra:DR1072 acetyl-CoA acetyltransferase, ev=0.0, 82% identity; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.678
Dgeo_1883
PFAM: Thiolase: (7e-144); KEGG: dra:DR1960 acetyl-CoA acetyltransferase, ev=1e-163, 73% identity; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.678
pdxY
Pyridoxal kinase; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP.
       0.662
Dgeo_1221
PFAM: acyl-CoA dehydrogenase-like: (1.1e-37) Acyl-CoA dehydrogenase, type 2-like: (6.6e-05); KEGG: dra:DR0551 glutaryl-CoA dehydrogenase, putative, ev=1e-173, 73% identity.
 
  0.611
Dgeo_0428
PFAM: acyl-CoA dehydrogenase-like: (2.9e-63) Acyl-CoA dehydrogenase, type 2-like: (8.1e-27); KEGG: dra:DR0922 acyl-CoA dehydrogenase, ev=0.0, 88% identity.
 
  0.610
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.