node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplI | Dgeo_0641 | Dgeo_0163 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L9; Binds to the 23S rRNA. | 0.995 |
rplA | rplK | Dgeo_0641 | Dgeo_0642 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplL | Dgeo_0641 | Dgeo_0639 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.998 |
rplA | rplT | Dgeo_0641 | Dgeo_0574 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
rplA | rplY | Dgeo_0641 | Dgeo_0469 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.999 |
rplA | rpmE | Dgeo_0641 | Dgeo_0577 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.999 |
rplA | rpmF | Dgeo_0641 | Dgeo_0013 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | TIGRFAM: ribosomal protein L32: (3.4e-34); PFAM: ribosomal L32p protein: (1.5e-31); KEGG: dra:DR2366 50S ribosomal protein L32, ev=2e-28, 91% identity; Belongs to the bacterial ribosomal protein bL32 family. | 0.999 |
rplA | rpmI | Dgeo_0641 | Dgeo_0573 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: ribosomal protein L35: (2.6e-09); KEGG: dra:DR2005 50S ribosomal protein L35, ev=1e-24, 82% identity; Belongs to the bacterial ribosomal protein bL35 family. | 0.999 |
rplA | rpsF | Dgeo_0641 | Dgeo_0166 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplA | rpsR | Dgeo_0641 | Dgeo_0164 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
rplI | rplA | Dgeo_0163 | Dgeo_0641 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.995 |
rplI | rplK | Dgeo_0163 | Dgeo_0642 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplI | rplL | Dgeo_0163 | Dgeo_0639 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.995 |
rplI | rplT | Dgeo_0163 | Dgeo_0574 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
rplI | rplY | Dgeo_0163 | Dgeo_0469 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.999 |
rplI | rpmE | Dgeo_0163 | Dgeo_0577 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.996 |
rplI | rpmF | Dgeo_0163 | Dgeo_0013 | Ribosomal protein L9; Binds to the 23S rRNA. | TIGRFAM: ribosomal protein L32: (3.4e-34); PFAM: ribosomal L32p protein: (1.5e-31); KEGG: dra:DR2366 50S ribosomal protein L32, ev=2e-28, 91% identity; Belongs to the bacterial ribosomal protein bL32 family. | 0.998 |
rplI | rpmI | Dgeo_0163 | Dgeo_0573 | Ribosomal protein L9; Binds to the 23S rRNA. | PFAM: ribosomal protein L35: (2.6e-09); KEGG: dra:DR2005 50S ribosomal protein L35, ev=1e-24, 82% identity; Belongs to the bacterial ribosomal protein bL35 family. | 0.998 |
rplI | rpsF | Dgeo_0163 | Dgeo_0166 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplI | rpsR | Dgeo_0163 | Dgeo_0164 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |