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hisS protein (Deinococcus geothermalis) - STRING interaction network
"hisS" - Histidine--tRNA ligase in Deinococcus geothermalis
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
hisSHistidine--tRNA ligase; KEGG- dra-DR1349 histidyl-tRNA synthetase , ev=1e-174, 72% identity; TIGRFAM- histidyl-tRNA synthetase- (2e-105); PFAM- tRNA synthetase, class II (G, H, P and S)- (1.9e-41) Anticodon-binding- (7.6e-11) (431 aa)    
Predicted Functional Partners:
Dgeo_1122
Aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction- L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily (577 aa)
   
   
  0.949
lysS
Lysine--tRNA ligase; TIGRFAM- lysyl-tRNA synthetase- (7.4e-180); PFAM- tRNA synthetase, class II (D, K and N)- (9.4e-128) nucleic acid binding, OB-fold, tRNA/helicase-type- (6.3e-18); KEGG- dra-DR0372 lysyl-tRNA synthetase , ev=0.0, 83% identity; Belongs to the class-II aminoacyl-tRNA synthetase family (512 aa)
     
 
  0.907
pheT
TIGRFAM- phenylalanyl-tRNA synthetase, beta subunit- (8.1e-157); KEGG- dra-DR2357 phenylalanyl-tRNA synthetase beta chain , ev=0.0, 73% identity (819 aa)
   
   
  0.888
tyrS
Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily (413 aa)
   
   
  0.845
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family (424 aa)
 
   
  0.829
pheS
Phenylalanine--tRNA ligase alpha subunit; KEGG- dra-DR2354 phenylalanyl-tRNA synthetase alpha chain , ev=1e-172, 85% identity; TIGRFAM- phenylalanyl-tRNA synthetase, alpha subunit- (6e-98); PFAM- phenylalanyl-tRNA synthetase, class IIc- (6.9e-142) aminoacyl tRNA synthetase, class II-like- (1.2e-27); Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily (339 aa)
 
 
  0.817
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily (670 aa)
 
 
  0.809
leuS
Leucine--tRNA ligase; TIGRFAM- leucyl-tRNA synthetase- (0); KEGG- dra-DR2174 leucyl-tRNA synthetase , ev=0.0, 81% identity; Belongs to the class-I aminoacyl-tRNA synthetase family (819 aa)
   
   
  0.803
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (885 aa)
 
   
  0.796
der
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis (441 aa)
        0.796
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis DSM11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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