STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
tatA-2Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (104 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.968
tatC
Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
 
 0.952
tatA-3
Sec-independent protein translocase component TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
  
 
0.908
tatA
Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 
0.905
Dgeo_1397
PFAM: protein kinase: (4.7e-40) Pyrrolo-quinoline quinone: (1.3e-05); SMART: Tyrosine protein kinase: (1.2e-12) Serine/threonine protein kinase: (1.5e-55); KEGG: dra:DR2518 serine/threonine protein kinase, putative, ev=0.0, 75% identity.
     
 0.616
Dgeo_1394
KEGG: dra:DR1656 Mg(2+) chelatase family protein, ev=0.0, 82% identity; TIGRFAM: Mg chelatase-related protein: (7e-220); PFAM: magnesium chelatase, ChlI subunit: (5.4e-149) ATPase associated with various cellular activities, AAA_5: (8.4e-05); SMART: ATPase: (3.8e-11).
       0.586
secF
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
  
 0.566
Dgeo_1781
PFAM: Rhomboid-like protein: (2.2e-24); KEGG: dra:DR1992 hypothetical protein, ev=2e-68, 63% identity.
   
 
 0.543
Dgeo_1395
TIGRFAM: degV family protein: (1.7e-45); PFAM: DegV: (2.4e-45); KEGG: dra:DR1986 DegV protein, ev=1e-32, 34% identity.
       0.506
hisI
PFAM: phosphoribosyl-AMP cyclohydrolase: (2.3e-45) phosphoribosyl-ATP pyrophosphohydrolase: (4.2e-36); KEGG: dra:DR0733 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase, ev=1e-102, 86% identity; In the N-terminal section; belongs to the PRA-CH family.
  
    0.477
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.