node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dgeo_1577 | rplJ | Dgeo_1577 | Dgeo_0640 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.991 |
Dgeo_1577 | rpsB | Dgeo_1577 | Dgeo_1049 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | PFAM: ribosomal protein S2: (8.9e-93); KEGG: dra:DR1513 30S ribosomal protein S2, ev=1e-131, 89% identity; Belongs to the universal ribosomal protein uS2 family. | 0.993 |
Dgeo_1577 | rpsD | Dgeo_1577 | Dgeo_1841 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
Dgeo_1577 | rpsE | Dgeo_1577 | Dgeo_1850 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.997 |
Dgeo_1577 | rpsG | Dgeo_1577 | Dgeo_1872 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.996 |
Dgeo_1577 | rpsH | Dgeo_1577 | Dgeo_1853 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.997 |
Dgeo_1577 | rpsK | Dgeo_1577 | Dgeo_1842 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
Dgeo_1577 | rpsL | Dgeo_1577 | Dgeo_1873 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.995 |
Dgeo_1577 | rpsM | Dgeo_1577 | Dgeo_1843 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.987 |
Dgeo_1577 | rpsQ | Dgeo_1577 | Dgeo_1858 | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.992 |
rplJ | Dgeo_1577 | Dgeo_0640 | Dgeo_1577 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | PFAM: RNA binding S1: (4.5e-24); KEGG: dra:DR1983 30S ribosomal protein S1, ev=0.0, 82% identity. | 0.991 |
rplJ | rpsB | Dgeo_0640 | Dgeo_1049 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | PFAM: ribosomal protein S2: (8.9e-93); KEGG: dra:DR1513 30S ribosomal protein S2, ev=1e-131, 89% identity; Belongs to the universal ribosomal protein uS2 family. | 0.996 |
rplJ | rpsD | Dgeo_0640 | Dgeo_1841 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.996 |
rplJ | rpsE | Dgeo_0640 | Dgeo_1850 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.995 |
rplJ | rpsG | Dgeo_0640 | Dgeo_1872 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.996 |
rplJ | rpsH | Dgeo_0640 | Dgeo_1853 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.996 |
rplJ | rpsK | Dgeo_0640 | Dgeo_1842 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.995 |
rplJ | rpsL | Dgeo_0640 | Dgeo_1873 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.995 |
rplJ | rpsM | Dgeo_0640 | Dgeo_1843 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.996 |
rplJ | rpsQ | Dgeo_0640 | Dgeo_1858 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.996 |