Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACA98454.1 | ACA98461.1 | SYNPCC7002_A0446 | SYNPCC7002_A0453 | Serine/threonine kinase; Similar to slr1697 of Synechocystis sp. PCC 6803. | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | 0.813 |
ACA98454.1 | spkA | SYNPCC7002_A0446 | SYNPCC7002_A1665 | Serine/threonine kinase; Similar to slr1697 of Synechocystis sp. PCC 6803. | Ser/Thr protein kinase SpkA; Similar to sll1574/sll1575 of Synechocystis sp. PCC 6803. | 0.403 |
ACA98461.1 | ACA98454.1 | SYNPCC7002_A0453 | SYNPCC7002_A0446 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Serine/threonine kinase; Similar to slr1697 of Synechocystis sp. PCC 6803. | 0.813 |
ACA98461.1 | ACA99671.1 | SYNPCC7002_A0453 | SYNPCC7002_A1682 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Serine/threonine protein kinase; Similar to slr1225 in Synechocystis sp. PCC 6803. | 0.819 |
ACA98461.1 | ACA99716.1 | SYNPCC7002_A0453 | SYNPCC7002_A1727 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Serine/threonine kinase; Similar to slr1225 in Synechocystis sp. PCC 6803. | 0.824 |
ACA98461.1 | ACB00601.1 | SYNPCC7002_A0453 | SYNPCC7002_A2624 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Hypothetical protein. | 0.711 |
ACA98461.1 | pknA | SYNPCC7002_A0453 | SYNPCC7002_A0870 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Serine/threonine kinase; Similar to gene all2334 of Nostoc sp. PCC 7120. | 0.825 |
ACA98461.1 | pknA-2 | SYNPCC7002_A0453 | SYNPCC7002_A2735 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Serine/threonine-protein kinase; Similar to alr4366 of Nostoc sp. PCC 7120. | 0.826 |
ACA98461.1 | pknC | SYNPCC7002_A0453 | SYNPCC7002_A0807 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Serine/threonine kinase; Similar to gene all3773 of Nostoc sp. PCC 7120. | 0.694 |
ACA98461.1 | pknD | SYNPCC7002_A0453 | SYNPCC7002_A0459 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Serine/threonine protein kinase C; Similar to slr0599 of Synechocystis sp. PCC 6803. | 0.825 |
ACA98461.1 | rsmB | SYNPCC7002_A0453 | SYNPCC7002_A0507 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Ribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase); Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.779 |
ACA98461.1 | spkA | SYNPCC7002_A0453 | SYNPCC7002_A1665 | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | Ser/Thr protein kinase SpkA; Similar to sll1574/sll1575 of Synechocystis sp. PCC 6803. | 0.822 |
ACA99671.1 | ACA98461.1 | SYNPCC7002_A1682 | SYNPCC7002_A0453 | Serine/threonine protein kinase; Similar to slr1225 in Synechocystis sp. PCC 6803. | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | 0.819 |
ACA99716.1 | ACA98461.1 | SYNPCC7002_A1727 | SYNPCC7002_A0453 | Serine/threonine kinase; Similar to slr1225 in Synechocystis sp. PCC 6803. | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | 0.824 |
ACA99716.1 | pknC | SYNPCC7002_A1727 | SYNPCC7002_A0807 | Serine/threonine kinase; Similar to slr1225 in Synechocystis sp. PCC 6803. | Serine/threonine kinase; Similar to gene all3773 of Nostoc sp. PCC 7120. | 0.518 |
ACB00601.1 | ACA98461.1 | SYNPCC7002_A2624 | SYNPCC7002_A0453 | Hypothetical protein. | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | 0.711 |
pknA | ACA98461.1 | SYNPCC7002_A0870 | SYNPCC7002_A0453 | Serine/threonine kinase; Similar to gene all2334 of Nostoc sp. PCC 7120. | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | 0.825 |
pknA-2 | ACA98461.1 | SYNPCC7002_A2735 | SYNPCC7002_A0453 | Serine/threonine-protein kinase; Similar to alr4366 of Nostoc sp. PCC 7120. | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | 0.826 |
pknC | ACA98461.1 | SYNPCC7002_A0807 | SYNPCC7002_A0453 | Serine/threonine kinase; Similar to gene all3773 of Nostoc sp. PCC 7120. | Protein phosphatase 2C; Similar to sll1771 of Synechocystis sp. PCC 6803. | 0.694 |
pknC | ACA99716.1 | SYNPCC7002_A0807 | SYNPCC7002_A1727 | Serine/threonine kinase; Similar to gene all3773 of Nostoc sp. PCC 7120. | Serine/threonine kinase; Similar to slr1225 in Synechocystis sp. PCC 6803. | 0.518 |
page 1 of 2