STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA99281.1Thioesterase family protein; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis; Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily. (146 aa)    
Predicted Functional Partners:
ACA99172.1
Polyketide synthase.
  
 
 0.996
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).
  
  
 0.928
ACA99966.1
AMP-binding enzyme; Similar to alr2678 of Nostoc sp. PCC 7120.
  
 
 0.640
ACA99280.1
Conserved hypothetical protein; Similar to sll1858 in Synechocystis sp. PCC 6803.
 
     0.616
ACA99332.1
Conserved hypothetical protein; Similar to slr1800 in Synechocystis sp. PCC 6803.
  
     0.567
fabD
Malonyl CoA-acyl carrier protein transacylase; Similar to slr2023 of Synechocystis sp. PCC 6803.
  
 
 0.540
ACB00279.1
Conserved hypothetical protein; Similar to slr1557 of Synechocystis sp. PCC 6803.
  
     0.514
glnB
Nitrogen regulatory protein P-II; Similar to ssl0707 in Synechocystis sp. PCC 6803; Belongs to the P(II) protein family.
  
    0.505
ACB00258.1
Conserved hypothetical protein; Similar to alr4310 of Nostoc sp. PCC 7120.
  
     0.485
menF
Isochorismate synthase; Similar to slr0817 in Synechocystis sp. PCC 6803.
  
   
 0.458
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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