STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnAGlutamine synthetase, type I; Involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia; Belongs to the glutamine synthetase family. (473 aa)    
Predicted Functional Partners:
gltS-2
Ferredoxin-dependent glutamate synthase 2; Similar to sll1499 of Synechocystis sp. PCC 6803.
  
 
 0.983
glnN
Glutamine synthetase type III; Similar to slr0288 of Synechocystis sp. PCC 6803; Belongs to the glutamine synthetase family.
    
 0.974
nirA
Nitrite reductase; Similar to slr0898 of Synechocystis sp. PCC 6803; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.972
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Similar to sll1561 in Synechocystis sp. PCC 6803; Belongs to the aldehyde dehydrogenase family.
 
 
 0.944
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.944
carB
Carbamoyl-phosphate synthase, large subunit; Similar to sll0370 of Synechocystis sp. PCC 6803; Belongs to the CarB family.
  
 
 0.941
carA
Carbamoyl-phosphate synthase, small subunit; Similar to sll1498 of Synechocystis sp. PCC 6803; Belongs to the CarA family.
  
 
 0.934
gdhA
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Similar to gene slr0710 of Synechocystis sp. PCC 6803; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.932
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
    
 0.925
ACA98669.1
Nitrilase; Similar to gene sll0784 of Synechocystis sp. PCC 6803.
    
 0.911
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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