STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degQTrypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain; Similar to sll1679 of Synechocystis sp. PCC 6803. (399 aa)    
Predicted Functional Partners:
sigF
SigF; Similar to all3853 of Nostoc sp. PCC 7120; Belongs to the sigma-70 factor family.
      
 0.781
ACA99172.1
Polyketide synthase.
  
 0.767
glgA2
Glycogen synthase 2 (Starch [bacterialglycogen] synthase 2); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
      
 0.678
glgA1
Glycogen synthase 1; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
      
 0.605
ACA99378.1
Two-component hybrid sensor and regulator; Similar to sll1228 in Synechocystis sp. PCC 6803.
  
  
 0.528
ACB00621.1
PAS domain S-box protein; Similar to all2875 of Nostoc sp. PCC 7120.
  
  
 0.528
ACA99645.1
Conserved hypothetical protein (DUF29); Similar to slr1203 of Synechocystis sp. PCC 6803.
   
  0.507
ACA99259.1
Two-component hybrid sensor and regulator; Similar to all2875 in Nostoc sp. PCC 7120.
  
  
 0.506
ACA99394.1
Mov34/MPN/PAD-1 family protein; Similar to sll0864 of Synechocystis sp. PCC 6803.
   
  0.479
slt
Soluble lytic transglycosylase; Similar to slr0534 of Synechococystis sp. PCC 6803.
  
  
 0.457
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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