STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA99776.1Protein phosphatase 2C domain protein; Similar to all1731 of Nostoc sp. PCC 7120. (736 aa)    
Predicted Functional Partners:
pknD
Serine/threonine protein kinase C; Similar to slr0599 of Synechocystis sp. PCC 6803.
  
   0.823
pknA
Serine/threonine kinase; Similar to gene all2334 of Nostoc sp. PCC 7120.
  
   0.823
spkA
Ser/Thr protein kinase SpkA; Similar to sll1574/sll1575 of Synechocystis sp. PCC 6803.
  
   0.823
pknA-2
Serine/threonine-protein kinase; Similar to alr4366 of Nostoc sp. PCC 7120.
  
   0.823
ACA99671.1
Serine/threonine protein kinase; Similar to slr1225 in Synechocystis sp. PCC 6803.
  
   0.817
ACA99716.1
Serine/threonine kinase; Similar to slr1225 in Synechocystis sp. PCC 6803.
 
 0.816
ACA98454.1
Serine/threonine kinase; Similar to slr1697 of Synechocystis sp. PCC 6803.
 
   0.809
rsmB
Ribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase); Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.779
ACB00601.1
Hypothetical protein.
   
 0.711
pknC
Serine/threonine kinase; Similar to gene all3773 of Nostoc sp. PCC 7120.
 
 0.696
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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