STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbcXRbcX protein, possible rubisco chaperone. (134 aa)    
Predicted Functional Partners:
rbcL
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
   
 
 0.975
rbcS
Ribulose bisphosphate carboxylase, small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family.
     
 0.958
ACB00366.1
Conserved hypothetical protein; Similar to sll0102 of Synechocystis sp. PCC 6803.
  
 
   0.931
ccmM
Carbon dioxide concentrating mechanism protein; Similar to sll1031 of Synechocystis sp. PCC 6803.
 
   
 0.914
cupA
CO2 hydration protein; Similar to sll1724 of Synechocystis sp. PCC 6803; protein involved in low CO2-inducible high affinity CO2 uptake.
  
   
 0.869
ccmN
Carbon dioxide concentrating mechanism protein; Similar to all0864 of Nostoc sp. PCC 7120.
  
   
 0.827
ACA99795.1
CO2 hydration protein; Similar to slr1302 of Synechocystis sp. PCC 6803.
  
   
 0.775
ACA99198.1
Conserved hypothetical protein; Similar to sll1274 in Synechocystis sp. PCC 6803.
  
     0.774
ACB00471.1
Conserved hypothetical protein; Similar to asr0773 of Nostoc sp. strain PCC 7120; similarity to C-terminus of Mo-dependent nitrogenase.
  
     0.774
ACB00071.1
Conserved hypothetical protein; Similar to asr0773 of Nostoc sp. PCC 7120; similarity to C-terminus of Mo-nitrogenase.
  
     0.773
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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