Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACA98146.1 | ACA99172.1 | SYNPCC7002_A0131 | SYNPCC7002_A1173 | Transcriptional regulator, MerR family; Similar to alr1629 of Nostoc sp. PCC 7120. | Polyketide synthase. | 0.488 |
ACA98146.1 | ACA99912.1 | SYNPCC7002_A0131 | SYNPCC7002_A1925 | Transcriptional regulator, MerR family; Similar to alr1629 of Nostoc sp. PCC 7120. | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | 0.693 |
ACA98146.1 | grpE | SYNPCC7002_A0131 | SYNPCC7002_A0695 | Transcriptional regulator, MerR family; Similar to alr1629 of Nostoc sp. PCC 7120. | Heat shock protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depen [...] | 0.521 |
ACA99172.1 | ACA98146.1 | SYNPCC7002_A1173 | SYNPCC7002_A0131 | Polyketide synthase. | Transcriptional regulator, MerR family; Similar to alr1629 of Nostoc sp. PCC 7120. | 0.488 |
ACA99172.1 | ACA99912.1 | SYNPCC7002_A1173 | SYNPCC7002_A1925 | Polyketide synthase. | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | 0.985 |
ACA99172.1 | ACA99966.1 | SYNPCC7002_A1173 | SYNPCC7002_A1979 | Polyketide synthase. | AMP-binding enzyme; Similar to alr2678 of Nostoc sp. PCC 7120. | 0.999 |
ACA99172.1 | dnaK | SYNPCC7002_A1173 | SYNPCC7002_A0476 | Polyketide synthase. | DnaK-type molecular chaperone; Similar to slr0086 of Synechocystis sp. PCC 6803; Belongs to the heat shock protein 70 family. | 0.553 |
ACA99172.1 | dnaK-2 | SYNPCC7002_A1173 | SYNPCC7002_A0694 | Polyketide synthase. | Chaperone protein DnaK, Heat shock 70 kDa protein 1; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.553 |
ACA99172.1 | dnaK-3 | SYNPCC7002_A1173 | SYNPCC7002_A2160 | Polyketide synthase. | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.553 |
ACA99172.1 | dnaK-4 | SYNPCC7002_A1173 | SYNPCC7002_A2418 | Polyketide synthase. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.553 |
ACA99172.1 | hoxF | SYNPCC7002_A1173 | SYNPCC7002_A0196 | Polyketide synthase. | Hydrogenase large diaphorase subunit F; Similar to sll1221 of Synechocystis sp. PCC 6803. | 0.999 |
ACA99172.1 | htpG | SYNPCC7002_A1173 | SYNPCC7002_A1902 | Polyketide synthase. | Heat shock protein; Molecular chaperone. Has ATPase activity. | 0.691 |
ACA99912.1 | ACA98146.1 | SYNPCC7002_A1925 | SYNPCC7002_A0131 | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | Transcriptional regulator, MerR family; Similar to alr1629 of Nostoc sp. PCC 7120. | 0.693 |
ACA99912.1 | ACA99172.1 | SYNPCC7002_A1925 | SYNPCC7002_A1173 | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | Polyketide synthase. | 0.985 |
ACA99912.1 | ACA99966.1 | SYNPCC7002_A1925 | SYNPCC7002_A1979 | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | AMP-binding enzyme; Similar to alr2678 of Nostoc sp. PCC 7120. | 0.965 |
ACA99912.1 | dnaK | SYNPCC7002_A1925 | SYNPCC7002_A0476 | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | DnaK-type molecular chaperone; Similar to slr0086 of Synechocystis sp. PCC 6803; Belongs to the heat shock protein 70 family. | 0.911 |
ACA99912.1 | dnaK-2 | SYNPCC7002_A1925 | SYNPCC7002_A0694 | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | Chaperone protein DnaK, Heat shock 70 kDa protein 1; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.953 |
ACA99912.1 | dnaK-3 | SYNPCC7002_A1925 | SYNPCC7002_A2160 | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.954 |
ACA99912.1 | dnaK-4 | SYNPCC7002_A1925 | SYNPCC7002_A2418 | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.955 |
ACA99912.1 | grpE | SYNPCC7002_A1925 | SYNPCC7002_A0695 | DnaJ domain containing protein; Similar to slr0093 of Synechocystis sp. PCC 6803. | Heat shock protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depen [...] | 0.836 |
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