STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
desAPhosphatidylcholine desaturase. (347 aa)    
Predicted Functional Partners:
desC
Delta-9 acyl-lipid desaturase; Similar to sll0541 of Synechocystis sp. PCC 6803.
 
  
 
 0.922
desF
Possible syn-2, delta 9 acyl-lipid fatty acid desaturase; Similar to all4991 of Nostoc sp. PCC 7120.
 
  
 
 0.786
ACA98675.1
Conserved hypothetical protein; Similar to slr1737 of Synechocystis sp. PCC 6803.
  
     0.740
desE
Fatty acid desaturase.
 
  
 
 0.715
ACA99239.1
Conserved hypothetical membrane protein; Similar to sll1925 in Synechocystis sp. PCC 6803.
  
     0.703
hggT
Homogentisate geranylgeranyl transferase; Similar to gene slr1736 of Synechocystis sp. PCC6803.
  
   
 0.617
fabF
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
   
  
 0.615
birA
biotin-acetyl-CoA-carboxylase ligase.
      
 0.593
hflX
Putative GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
      
 0.592
nusG
Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.
      
 0.592
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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