Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAK23804.1 | CAK23805.1 | SynWH7803_1378 | SynWH7803_1379 | Uncharacterized conserved membrane protein. | Conserved hypothetical protein. | 0.834 |
CAK23804.1 | CAK23807.1 | SynWH7803_1378 | SynWH7803_1381 | Uncharacterized conserved membrane protein. | Cation efflux family protein. | 0.480 |
CAK23804.1 | crtH | SynWH7803_1378 | SynWH7803_1380 | Uncharacterized conserved membrane protein. | Carotenoid isomerase. | 0.659 |
CAK23804.1 | trmFO | SynWH7803_1378 | SynWH7803_1382 | Uncharacterized conserved membrane protein. | Protein gid homolog; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.434 |
CAK23805.1 | CAK23804.1 | SynWH7803_1379 | SynWH7803_1378 | Conserved hypothetical protein. | Uncharacterized conserved membrane protein. | 0.834 |
CAK23805.1 | CAK23807.1 | SynWH7803_1379 | SynWH7803_1381 | Conserved hypothetical protein. | Cation efflux family protein. | 0.480 |
CAK23805.1 | crtH | SynWH7803_1379 | SynWH7803_1380 | Conserved hypothetical protein. | Carotenoid isomerase. | 0.618 |
CAK23805.1 | trmFO | SynWH7803_1379 | SynWH7803_1382 | Conserved hypothetical protein. | Protein gid homolog; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.416 |
CAK23807.1 | CAK23804.1 | SynWH7803_1381 | SynWH7803_1378 | Cation efflux family protein. | Uncharacterized conserved membrane protein. | 0.480 |
CAK23807.1 | CAK23805.1 | SynWH7803_1381 | SynWH7803_1379 | Cation efflux family protein. | Conserved hypothetical protein. | 0.480 |
CAK23807.1 | crtH | SynWH7803_1381 | SynWH7803_1380 | Cation efflux family protein. | Carotenoid isomerase. | 0.601 |
CAK23807.1 | psbY | SynWH7803_1381 | SynWH7803_1383 | Cation efflux family protein. | Photosystem II PsbY protein; Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II. Belongs to the PsbY family. | 0.488 |
CAK23807.1 | trmFO | SynWH7803_1381 | SynWH7803_1382 | Cation efflux family protein. | Protein gid homolog; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.655 |
CAK23810.1 | psbY | SynWH7803_1384 | SynWH7803_1383 | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. | Photosystem II PsbY protein; Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II. Belongs to the PsbY family. | 0.609 |
CAK23810.1 | trmFO | SynWH7803_1384 | SynWH7803_1382 | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. | Protein gid homolog; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.444 |
CAK24546.1 | trmFO | SynWH7803_2120 | SynWH7803_1382 | Predicted N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily. | Protein gid homolog; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.444 |
CAK24546.1 | uppS | SynWH7803_2120 | SynWH7803_1531 | Predicted N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.646 |
crtH | CAK23804.1 | SynWH7803_1380 | SynWH7803_1378 | Carotenoid isomerase. | Uncharacterized conserved membrane protein. | 0.659 |
crtH | CAK23805.1 | SynWH7803_1380 | SynWH7803_1379 | Carotenoid isomerase. | Conserved hypothetical protein. | 0.618 |
crtH | CAK23807.1 | SynWH7803_1380 | SynWH7803_1381 | Carotenoid isomerase. | Cation efflux family protein. | 0.601 |
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