STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAK24938.1Glycine/D-amino acid oxidases (deaminating). (340 aa)    
Predicted Functional Partners:
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.723
CAK24937.1
Uncharacterized conserved secreted protein.
       0.605
crtR
Beta-carotene hydroxylase.
  
   
 0.581
pstSI
ABC transporter, substrate binding protein, phosphate; Belongs to the PstS family.
       0.561
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.529
moeB
Molybdopterin biosynthesis protein.
  
  
 0.524
gltS
Ferredoxin-dependent glutamate synthase.
  
  
 0.518
CAK22759.1
Uncharacterized conserved membrane protein.
  
     0.465
CAK24154.1
Integral membrane protein; Belongs to the BI1 family.
  
     0.464
CAK23529.1
Conserved hypothetical protein.
  
     0.438
Your Current Organism:
Synechococcus sp. WH 7803
NCBI taxonomy Id: 32051
Other names: S. sp. WH 7803, Synechococcus WH7803, Synechococcus sp. (strain WH7803), Synechococcus sp. WH7803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.